The first recorded outbreak of syphilis occurred in Europe in 1495, a few years after Columbus sailed the ocean blue. Was syphilis a New World disease newly introduced into Europe by Columbus and his crew, or was it an Old World disease that simply was not noticed until 1495? A study from Harper and colleagues published last January described a molecular genetic analysis that may have yielded important clues hidden within the genetic material of Treponema pallidum.
The authors first examined the evolutionary relationships among Treponema pallidum strains from subspecies pertenue, endemicum, and pallidum, which are responsible for the diseases yaws, bejel, and syphilis, respectively. The small collection of strains or their DNA was obtained from different patients throughout the past century. The tree illustrated below (Figure 3 of Harper et al.) was constructed from the alignment of 70 SNPs (single nucleotide polymorphisms) and 12 indels (insertions/deletions). The branching pattern indicates that pertenue emerged the earliest. Subspecies endemicum later emerged from pertenue, and pallidum, the agent of syphilis, arose most recently.

The world map illustrated below (Figure 4 of Harper et al.) depicts the path of sequence changes in the 4 SNPs among the Treponema strains. The dots mark the geographic source of each strain used in the analysis. The red and green colors demark areas of endemicity of the nonvenereal diseases yaws and bejel, respectively, around the year 1900. The map shows that T. pallidum first appeared as pertenue in the Old World and gave rise to the endemicum subspecies, which migrated with humans to the Middle East and Europe. The Old World pertenue or endemicum strain then eventually gave rise to the New World pertenue strain as humans crossed the Bering Land Bridge and spread throughout the Americas. The sequence identity of the Guyanan strains with the pallidum strains at all 4 positions is consistent with the New World strain being introduced back into the Old World as a progenitor of today's syphilis-causing pallidum strains, which are now found worldwide. Clinical evidence also supports the New World model: the nonvenereal skin lesions in the Guyanan yaws patients resembled syphilis chancres rather than the typical skin lesions found with yaws.

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